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CMS Guidance: Reporting Claims for COVID-19 Testing in the T-MSIS Claims Files

Guidance History

DateDescription of Change
4/3/2020Original guidance issued
7/31/2020
  • Language added to Brief Issue Description, Background Discussion, and CMS Guidance sections to clarify that claims coding requirements are only applicable to uninsured individuals who receive limited Medicaid coverage for COVID-19 testing.
  • Addition of Table 2: Suggested mapping of new COVID-19 T-MSIS valid values and procedure codes for uninsured individuals who receive limited Medicaid coverage for COVID-19 testing.

Brief Issue Description

This guidance specifies state reporting expectations for Transformed Medicaid Statistical Information System (T-MSIS) claims data for COVID-19 testing and testing-related services for uninsured individuals who receive limited Medicaid coverage for COVID-19 testing. Coronavirus Disease 2019, or COVID-19, is a respiratory disease caused by a novel coronavirus.[1] The U.S. Secretary of Health and Human Services, Alex M. Azar II, declared a public health emergency as a result of confirmed cases of COVID-19 in the United States. The declaration is retroactive to January 27, 2020.[2] This document provides guidance to states to report COVID-19 services in the T-MSIS Claims files.

Background Discussion

Context

Section 6004(a)(3) of the Families First Coronavirus Response Act (FFCRA) added Section 1902(a)(10)(A)(ii)(XXIII) to the Social Security Act (the Act).[3] During any portion of the public health emergency period beginning March 18, 2020, this provision permits states to temporarily cover uninsured individuals through an optional Medicaid eligibility group for the limited purpose of COVID-19 testing. Such medical assistance, as limited by clause XVIII in the text following Section 1902(a)(10)(G) of the Act, includes: in vitro diagnostic products for the detection of SARS–CoV–2 or the diagnosis of the virus that causes COVID–19, and any visit for COVID–19 testing-related services for which payment may be made under the State plan. For the purposes of this eligibility group, please reference the COVID-19 FAQs on implementation of Section 6008 of the Families First Coronavirus Response Act and Coronavirus Aid, Relief, and Economic Security (CARES) Act for the definition of an uninsured individual.[4] States can claim 100 percent FMAP for services provided to an individual enrolled in the COVID-19 testing group. The 100 percent match is only available for the testing and testing-related services provided to beneficiaries enrolled in the new COVID-19 testing group (and for related administrative expenditures).

While not directly applicable to Medicaid, the FFCRA (section 6001) defines testing-related services for group health plans and health issuers as “Items and services furnished to an individual during health care provider office visits (which term in this paragraph includes in-person visits and telehealth visits), urgent care center visits, and emergency room visits that result in an order for or administration of an in vitro diagnostic product described in paragraph (1), but only to the extent such items and services relate to the furnishing or administration of such product or to the evaluation of such individual for purposes of determining the need of such individual for such product.”[5] Though not necessarily applicable to all Medicaid programs, Medicare uses HCPCS/CPT modifier “CS” to identify COVID-19 testing and testing-related services that are exempt from cost-sharing.[6]

Challenges

As states begin providing COVID-19 testing and testing-related services to uninsured individuals who receive limited Medicaid coverage for COVID-19 testing, states must accurately report this information in the T-MSIS Claims files. Without uniform reporting, it is difficult to analyze COVID-19 diagnostic products and testing-related services and expenditures. In addition, as things are changing rapidly, states are encouraged to periodically review the COVID-19 FAQs published by the Centers for Medicare and Medicaid Services.[7]

CMS Guidance

To address the completeness and accuracy of reporting services for uninsured individuals who receive limited Medicaid coverage for COVID-19 testing and testing-related services, CMS has provided the following guidance to report services and expenditures in the T-MSIS Claims files. For current Medicaid and CHIP beneficiaries, states should map services and expenditures in the T-MSIS Claims files to the valid values for BENEFIT-TYPE, PROGRAM-TYPE, and TYPE-OF-SERVICE that would be used if the services weren't specifically for COVID-19 testing or COVID-19 testing-related services (for instance, using laboratory services). In addition, states who previously implemented the new T-MSIS values for COVID-19 reporting of claims for current Medicaid and CHIP beneficiaries will not need to resubmit their claims given this guidance update. States should make this change moving forward with their T-MSIS Claims files for existing Medicaid and CHIP beneficiaries. For uninsured individuals, it’s important for states to submit the new TYPE-OF-SERVICE, BENEFIT-TYPE, and PROGRAM-TYPE valid values as far back as is applicable to the uninsured population. Some states may need to fix and resubmit for claims for uninsured individuals.

There are three data elements in the T-MSIS Claims files that states should use to report COVID-19 diagnostic products and testing-related services: BENEFIT-TYPE (CIP268, CLT218, COT209, CRX148), PROGRAM-TYPE (CIP129, CLT079, COT065, CRX055), and TYPE-OF-SERVICE (CIP257, CLT211, COT186, CRX134). Table 1 shows the changes to the valid values for these data elements. These changes will be incorporated into the T-MSIS data dictionary at a future date but should be implemented by states immediately.

Table 1. T-MSIS Data Dictionary new valid values and descriptions to capture COVID-19 diagnostic products and testing-related services for uninsured individuals who receive limited Medicaid coverage for COVID-19 testing (to be implemented by states immediately)
Data ElementNew ValueNew Value Description
PROGRAM-TYPE (CIP129, CLT079, COT065, CRX055)17COVID-19 Testing and Testing-Related Services
TYPE-OF-SERVICE (CIP257, CLT211, COT186, CRX134)136In vitro diagnostic products (as defined in section 809.3(a) of title 21, Code of Federal Regulations) administered during any portion of the emergency period defined in paragraph (1)(B) of section 1135(g) beginning on or after the date of the enactment of this subparagraph for the detection of SARS–CoV–2 or the diagnosis of the virus that causes COVID–19, and the administration of such in vitro diagnostic products
137COVID–19 testing-related services
BENEFIT-TYPE (CIP268, CLT218, COT209, CRX148)107In vitro diagnostic products (as defined in section 809.3(a) of title 21, Code of Federal Regulations) administered during any portion of the emergency period defined in paragraph (1)(B) of section 1135(g) beginning on or after the date of the enactment of this subparagraph for the detection of SARS–CoV–2 or the diagnosis of the virus that causes COVID–19, and the administration of such in vitro diagnostic products
108COVID–19 testing-related services

There are data elements captured at both the header and line level on the Claims files that should be reported for uninsured individuals who receive limited Medicaid coverage for COVID-19 testing and testing-related services. States should ensure that there is consistency across these data elements for COVID-19 reporting. For example, a claim for a COVID-19 test should be reported with TYPE-OF-SERVICE “136” and BENEFIT-TYPE “107” at the line level and PROGRAM-TYPE “17” at the header level of the claim.

  • CLAIM-HEADER-RECORD- IP/LT/OT/RX- CIP00002/CLT0002/COT00002/CRX00002
    • PROGRAM-TYPE (CIP129, CLT079, COT065, CRX055): A value of “17” should be reported for any COVID-19 diagnostic product that is administered during any portion of the emergency period, beginning March 18, 2020, or COVID–19 testing-related services for which payment may be made under the State plan. PROGRAM-TYPE “17” should always be reported at the header level for claims for uninsured individuals who receive limited Medicaid coverage for COVID-19 testing and testing-related services.
  • CLAIM-LINE-RECORD-IP/LT/OT/RX- CIP00003/CLT00003/COT00003/CRX00003
    • TYPE-OF-SERVICE (CIP257, CLT211, COT186, CRX134):
      • A value of “136” should be reported for any COVID-19 diagnostic product that is administered during any portion of the emergency period, beginning March 18, 2020, to an uninsured individual who receives limited Medicaid coverage for COVID-19 testing and testing-related services.
      • A value of “137” should be reported for any COVID–19 testing-related services provided to an uninsured individual who receives limited Medicaid coverage for COVID-19 testing and testing-related services for which payment may be made under the State plan.
    • BENEFIT-TYPE (CIP268, CLT218, COT209, CRX148):
      • A value of “107” should be reported for any COVID-19 diagnostic product that is administered during any portion of the emergency period, beginning March 18, 2020, to an uninsured individual who receives limited Medicaid coverage for COVID-19 testing and testing-related services.
      • A value of “108” should be reported for any COVID–19 testing-related services provided to an uninsured individual who receives limited Medicaid coverage for COVID-19 testing and testing-related services for which payment may be made under the State plan.

CMS recognizes that states have worked with their billing/policy staff to make changes to T-MSIS to report COVID-19 testing and testing-related services. Further COVID-19 guidance about other data elements such as XIX-MBESCBES-CATEGORY-OF-SERVICE (CIP270, CLT224, COT211, CRX150) and XXI-MBESCBES-CATEGORY-OF-SERVICE (CIP271, CLT225, COT212, CRX151) may follow. CMS has also updated validation rule logic in the Operational Dashboard to accept new CPT, HCPCS, ICD-10 and any other national standard codes used to identify COVID-19 related services.

Table 2 below provides suggested mapping of relevant procedure codes to program type, type of service, and benefit types codes. The codes below are provided as an initial starting point for procedure codes that would be expected to be reported for testing and testing-related services. States may also consider diagnosis codes in their mapping. Please note that states are not limited to only the procedure codes identified in Table 2 for testing and testing-related services if your state has identified additional services codes.

Table 2. Suggested mapping of new COVID-19 T-MSIS valid values and procedure codes for uninsured individuals who receive limited Medicaid coverage for COVID-19 testing
Service categoryDescriptionPROGRAM-TYPETYPE-OF-SERVICEBENEFIT-TYPEType of service specified in FFCRAPROCEDURE-CODE
Diagnostic testingTo identify diagnostic testing services, identify claim lines with one of the procedure codes in the PROCEDURE-CODE column.17136107COVID testingU0001
Diagnostic testingTo identify diagnostic testing services, identify claim lines with one of the procedure codes in the PROCEDURE-CODE column.17136107COVID testingU0002
Diagnostic testingTo identify diagnostic testing services, identify claim lines with one of the procedure codes in the PROCEDURE-CODE column.17136107COVID testingU0003
Diagnostic testingTo identify diagnostic testing services, identify claim lines with one of the procedure codes in the PROCEDURE-CODE column.17136107COVID testingU0004
Diagnostic testingTo identify diagnostic testing services, identify claim lines with one of the procedure codes in the PROCEDURE-CODE column.17136107COVID testing87635
Diagnostic testingTo identify diagnostic testing services, identify claim lines with one of the procedure codes in the PROCEDURE-CODE column.17136107COVID testingG2023
Diagnostic testingTo identify diagnostic testing services, identify claim lines with one of the procedure codes in the PROCEDURE-CODE column.17136107COVID testingG2024
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99201
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99202
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99203
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99204
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99205
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99211
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99212
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99213
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99214
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Outpatient/Office evaluation and management service99215
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99217
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99218
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99219
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99220
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99224
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99225
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99226
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99234
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99235
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Observation evaluation and management service99236
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Emergency department and management service99281
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Emergency department and management service99282
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Emergency department and management service99283
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Emergency department and management service99284
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Emergency department and management service99285
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99304
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99305
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99306
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99307
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99308
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99309
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99310
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99315
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Nursing facility evaluation and management service99316
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99324
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99325
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99326
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99327
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99328
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99334
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99335
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99336
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Domiciliary, rest home, or custodial care evaluation and management service99337
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99341
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99342
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99343
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99344
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99345
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99347
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99348
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99349
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Home evaluation and management service99350
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Online evaluation and management service99421
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Online evaluation and management service99422
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Online evaluation and management service99423
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Online evaluation and management serviceG2010
Testing-related servicesTo identify testing related services, identify claim headers with at least 1 diagnostic testing service (based on PROCEDURE-CODE) and one evaluation and management code.17137108Online evaluation and management serviceG2012

[2] Determination that a Public Health Emergency Exists

[3] H.R.6201 - Families First Coronavirus Response Act

[4] COVID-19 FAQs

[5] H.R.6201 - Families First Coronavirus Response Act

[6] COVID-19: Infection Control, Maximizing Workforce, Updated Q&A, CS Modifier for Cost-Sharing, Payment Adjustment Suspended

[7] COVID-19 Frequently Asked Questions (FAQs) on Medicare Fee-for-Service (FFS) Billing

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